Procesos de precipitación mineral bioinducidos en sistemas kársticos subterráneos: breve revisión y nuevas tendencias
DOI:
https://doi.org/10.3989/egeol.066215Keywords:
microbial community, geomicrobiology, bioreceptivity, biomineralization, karst, caveAbstract
Microorganisms, particularly bacteria, inhabit all possible environments in the biosphere including subterranean ones. They play an important role in geological processes such as mineral precipitation and dissolution, and significantly influence biogeochemical cycles. At present, relatively few studies have focused on the active role of microorganisms, especially bacteria, in the formation of speleothems. Thus, the involvement of microbial activity in the formation of speleothems in caves is a geomicrobiological issue still to be solved. Today, the relationship between microorganisms and mineral fabrics and the role played by microorganisms in carbonate precipitation is unclear. The processes of carbonate deposit formation in caves offers an excellent scenario for research on biomineralization processes (from active microorganisms to their mineral deposits), because caves are protected environments where microbial fabrics can be preserved without extensive diagenetic modification or destruction. The new tendencies on geomicrobiological studies consist on applying different and multidisciplinary methodological approaches (petrology, geochemistry, microbiology, molecular biology) to (1) determine the role of the different microbial communities inhabiting the hypogean environments in the processes of mineral transformation, (2) identifying the physical and chemical properties of bioinduced crystalline phases, and (3) determine the environmental conditions, composition and texture of natural substrates (bioreceptivity) favouring or inhibiting the development of microbial communities.
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Albertano P., Moscone D., Palleschi G., Hermosin B., Saiz-Jiménez C., Sánchez-Moral S., Hernández-Marine M., Urzì C., Groth I., Schroeckh V., Saarela M., Mattila- Sandholm T., Gallon J. R., Graziottin F., Bisconti F., Giuliani R. (2003). Cyanobacteria attack rocks (CATS): Control and preventive strategies to avoid damage caused by cyanobacteria and associated microorganisms in Roman Hypogean Monuments. In: Molecular Biology and Cultural Heritage (C. Saiz-Jiménez, edit.). Swets & Zeitlinger, Lisse (NL), 151-162.
Ascaso, C. y Wierzchos, J. (2003). The search for biomarkers and microbial fossils in Antarctic rock microhabitats. Geomicrobiol. J., 20: 439-450. doi:10.1080/713851127
Awramik, S. M. (1992). The oldest records of photosynthesis. Photosynthesis Res., 33: 75-89. doi:10.1007/BF00039172
Banfield, J. F. y Nealson, K. H. (1997). Geomicrobiol. Rev. Mineral., 35: 448.
Barton, H. A., Taylor, M. R. y Pace, N. R. (2004). Molecular Phylogenetic Analysis of a Bacterial Community in an Oligotrophic Cave Environment. Geomicrobiol. J., 21: 11-20. doi:10.1080/01490450490253428
Baskar, S., Baskar, R., Mauclaire, L., McKenzie, J. A. (2006). Microbially induced calcite precipitation in culture experiments: Possible origin for stalactites in Sahastradhara caves, Dehradun, India. Curr. Sci. India, 90: 58-64.
Blair, N., Leu, A., Muñoz, E., Olsen, J., Kwong, E. y Des Marais, D. (1985). Carbon isotopic fractionation in heterotrophic microbial metabolism. Appl. Environ. Microb., 50: 996-1001.
Bolliger, C., Schönholzer, F., Schroth, M. H., Hahn, D., Bernasconi, S. y Zeyer, J. (2000). Characterizing intrinsic bioremediation in a petroleum hydrocarboncontaminated aquifer by combined chemical, isotopic and biological analyses. Bioremed. J., 4: 359-371. doi:10.1080/10889860091114301
Boquet, E., Bordonat, A. y Ramos Cormenzana, A. (1973). Production of calcite crystals by soil bacteria is a general phenomenon. Nature, 246: 527-528. doi:10.1038/246527a0
Borsato, A., Frisia, S., Jones, B. y Van der Borg, K. (2000). Calcite moonmilk: cristal morphology and environment of formation in caves in the Italian Alps. J. Sedim. Res., 70: 1179-1190. doi:10.1306/032300701171
Brock, T. D. y Madigan, M. T. (1991). Biology of microoganisms. 6th edition. Prentice Hall, Englewood Cliffs, New Jersey, 991 págs.
Buzolyova, L. S. y Somov, G. P. (1999). Autotrophic assimilation of CO2 and C1-compounds by pathogenic bacteria. Biochemistry (Moscow), 64: 1146-1149.
Cacchio, P., Contento, R., Ercole, C., Cappuccio, G., Preite-Martínez, M. y Lepidi, A. (2004). Involvement of Microorganisms in the Formation of Carbonate Speleothems in the Cervo Cave (L’Aquila-Italy). Geomicrobiol. J., 21: 497-509. doi:10.1080/01490450490888109
Cañaveras, J. C., Sánchez-Moral, S., Sanz Rubio, E., Bedoya, J., Soler, V., Groth, I., Schumann, P., Laiz, L., González, I. y Saiz-Jiménez, C. (1999). Microbial communities associated to hydromagnesite and needle fiber aragonite deposits in a karstic cave (Altamira, Northern Spain). Geomicrobiol. J., 16: 9-25. doi:10.1080/014904599270712
Cañaveras, J. C., Sánchez-Moral, S., Soler, V. y Saiz- Jiménez, C. (2001). Microorganisms and Microbially Induced Fabrics in Cave Walls. Geomicrobiol. J., 18: 223-240. doi:10.1080/01490450152467769
Cañaveras, J. C., Cuezva, S., Sánchez-Moral, S., Lario, J., Laiz, L., González, J. M. y Saiz-Jiménez, C. (2006). On the origin of fiber calcite crystals in moonmilk deposits. Naturwissenschaften, 93: 27-32. doi:10.1007/s00114-005-0052-3
Castanier, S., Le Métayer-Levrel, G. y Perthuisot J.-P. (1999). Ca-carbonates precipitation and limestone genesis-the microbiogeologist point of view. Sedim. Geol., 126: 9-23. doi:10.1016/S0037-0738(99)00028-7
Castanier, S., Le M’etayer-Levrel, G., Perthuisot, J. P. Bacterial roles in the precipitation of carbonate minerals. (2000). In: Microbial Sediments (R. E. Riding, R. E. y S. M. Awramik, edit.) Springer-Verlag, Heidelberg, 32-39.
Coates, J. D., Ellis, D. J., Gaw, C. V. y Lovley, D. R. (1999). Geothrix fermentans gen. nov., sp. nov., a novel Fe(III)-reducing bacterium from a hydrocarbon-contaminated aquifer. Int. J. Syst. Bacteriol., 49: 1615-1622.
Cuezva, S., Cañaveras, J. C., González, R., Lario, J., Luque, L., Saiz, C., Sánchez-Moral, S. y Soler, V. (2003). Origen bacteriano de espelotemas tipo moonmilk en ambiente kárstico (Cueva de Altamira, España). Estudios Geol., 59: 145-157.
Dove, P. M., De Yoreo, J. J. y Weiner S. (edit.) (2003). Biomineralization. Reviews in Mineralogy & Geochemistry, 54. Geochemical Society, St. Louis, MO, and Mineralogical Society of America, Washington, 381 págs.
Ehrlich, H. L. (1998). Geomicrobiology.: its significance for geology. Earth-Sci. Rev., 45: 45-60. doi:10.1016/S0012-8252(98)00034-8
Ehrlich, H. L. (2002). Geomicrobiology., 4th ed. Marcel Dekker, New York, 768 págs.
Engel, A. S., Porter, M. I., Kinkle, B. K. y Kane, T. C. (2001). Ecological assessment and geological significance of microbial communities from Cesspool Cave, Virginia. Geomicrobiol. J., 18: 259-274. doi:10.1080/01490450152467787
Forti, P. (2001). Biogenic speleothems: an overwiew. Int. J. Speleol., 30: 39-56.
González, J. M. y Saiz-Jiménez, C. (2004). Microbial activity in biodeteriorated monuments as studied by denaturing gradient gel electrophoresis. J. of Separation Science, 27: 174-180. doi:10.1002/jssc.200301609
González, J. M. y Saiz-Jiménez, C. (2005). Application of molecular nucleic acid-based techniques for the study of microbial communities in monuments. Int. Microbiol., 8: 189-194.
González, J. M., Portillo, M. C., Saiz-Jiménez, C. (2006). Metabolically active Crenarchaeota in Altamira Cave. Naturwissenschaften, 93: 42-45. doi:10.1007/s00114-005-0060-3
Guillitte, O. (1995). Bioreceptivity: a new concept for building ecology studies. Sci. Total Environ., 167: 215-220. doi:10.1016/0048-9697(95)04582-L
Holmes, A. J., Tujula, N. A., Holley, M., Contos, A., James, J. M., Rogers, P., Gillings, M. R. (2001). Phylogenetic structure of unusual aquatic microbial formations in Nullarbor caves, Australia. Environ. Microbiol., 3: 256-264. doi:10.1046/j.1462-2920.2001.00187.x
Hose, L. D., Palmer, A. N., Palmer, M. V., Northup, D. E., Boston, P. J. y Duchene, H. R. (2000). Microbiology and geochemistry in a hydrogen-sulphide-rich karst environment. Chem. Geol., 169: 399-423. doi:10.1016/S0009-2541(00)00217-5
Hoyos, M., Soler, V., Cañaveras, J. C., Sánchez-Moral, S. y Sanz-Rubio, E. (1998). Microclimatic characterization of a karst system. Human impact on microenvironmental parameters of a prehistoric rock art cave (Candamo Cave, northern Spain). Environ. Geol., 33: 231-242. doi:10.1007/s002540050242
Kellerman, K. F. (1915). Relation of bacteria to deposition of calcium carbonate. Geol. Soc. Am. Bull., 26: 58.
Laiz, L., González, J. M., y Saiz-Jiménez, C. (2003). Microbial communities in caves: Ecology, physiology, and effects on paleolythic paintings. In: Art, Biology, and Conservation: Biodeterioration of works of Art (R. J. Koestler, V. R. Koestler, A. E. Carola y F. E. Nieto-Fernández, edit.). The Metropolitan Museum of Art, New York, 210-225.
Mastromei, G., Biagiotti, L., Daly, S., Perito, B. y Tiano, P. (1999). Stone reinforcement by biomediated calcite crystal precipitation. International Conference on Microbiology and Conservation, (ICMC’99), Florence, 253-256.
McCallum, M. F., y Guhathakurta, K. (1970). The precipitation of calcium carbonate from seawater by bacteria isolated from Bahama bank sediments. J. Appl. Bacteriol., 33: 649-655.
Molin, S. y Givskov, M. (1999). Application of molecular tools for in situ monitoring of bacterial growth activity. Environ. Microbiol., 1: 383-391. doi:10.1046/j.1462-2920.1999.00056.x
Northup, D. E., Reysenbach, A. y Pace, N. (1997). Microorganisms and speleothems. In: Cave Minerals of the World (Hill, C. y Forti, P., edit.). NSS, Huntsville, 261-266.
Northup, D. E., Dahm, C. N., Melim, L. A., Spilde, M. N, Crossey, L. J., Lavoie, K. H., Mallory, L. M., Boston, P. J., Cunningham, K. I., y Barns, S. M. (2000). Evidence por geomicrobiological interactions in Guadalupe caves. J. Cave Karst Stud., 62: 80-90.
Northup, D. E. y Lavoie, K. H. (2001). Geomicrobiol. Of caves: A review. Geomicrobiol. J., 18: 199-220. doi:10.1080/01490450152467750
Rivadeneyra, M. A., Delgado, R., Delgado, G., Del Moral, A., Ferrer, M. R., Ramos-Cormenzana, A. (1994). Precipitation of carbonates by Bacillus sp. Isolated from saline soils. Geomicrobiol. J., 11: 174-184.
Rodríguez-Navarro, C., Rodríguez-Gallego, M., Ben Chekroun, K. y González-Muñoz, M. T. (2003). Conservation of Ornamental Stone by Myxococcus xanthus- Induced Carbonate Biomineralization. Appl. Environ. Microb., 69: 2182-2193. doi:10.1128/AEM.69.4.2182-2193.2003
Sánchez-Moral, S., Cañaveras, J. C., Laiz, L, Saiz, C., Bedoya, J. y Luque, L. (2003a). Biomediated precipitation of calcium carbonate metastable phases in hypogean environments. A short review. Geomicrobiol. J., 20: 491-500. doi:10.1080/713851131
Sánchez-Moral, S., Bedoya, J., Luque, L., Cañaveras, J. C., Jurado, V., Laiz, L. y Saiz, C. (2003b). Biomineralization of different crystalline phases by bacteria isolated from catacombs. In: Molecular Biology & Cultural Heritage (C. Saiz, edit.). Balkema, Lisse, 179-185.
Sánchez-Moral, S., Luque, L., Cañaveras, J. C., Laiz, L., Jurado, V., Hermosín, B. y Saiz-Jiménez, C. (2004). Bioinduced barium precipitation in San Callixtus and Domitilla Catacombs. Ann. Microbiol., 54: 1-12.
Sánchez-Moral, S., Luque, L., Cuezva, S., Soler, V., Benavente, D., Laiz, L., González, J. M., Saiz, C. (2005). Deterioration of building materials in Roman catacombs: The influence of visitors. Sci. Total Environ., 349: 260-276. doi:10.1016/j.scitotenv.2004.12.080
Schabereiter-Gurtner, C., Saiz-Jiménez, C., Piñar, G., Lubitz, W. y Rölleke, S. (2002). Altamira cave Paleolithic paintings harbor partly unknown bacterial communities. FEMS Microbiol. Lett., 211: 7-11. doi:10.1111/j.1574-6968.2002.tb11195.x
Schabereiter-Gurtner, C., Saiz, C., Piñar, G., Lubitz, R. y Rölleke, S. (2004). Phylogenetic diversity of bacteria associated with Paleolithic painting and surrounding rock walls in two spanish caves (Llonín, La Garma). FEMS Microbiol. Ecol., 47: 235-247. doi:10.1016/S0168-6496(03)00280-0
Smith, K. S. y Ferry, J. G. (2000). Prokaryotic carbonic anhydrases. FEMS Microbiol. Rev., 24: 335-366. doi:10.1111/j.1574-6976.2000.tb00546.x
Stevenson, B. S., Eichorst, S. A., Wertz, J. T., Schmidt, T. M. y Breznak, J. A. (2004). New strategies for cultivation and detection of previously uncultured microbes. Appl. environ. Microbiol., 70: 4748-4755. doi:10.1128/AEM.70.8.4748-4755.2004
Tripp, B. C., Smith, K. y Ferry, J. G. (2001). Carbonic anhydrase: new insights for an ancient enzyme. J. Biol. Chem., 276: 48615-48618. doi:10.1074/jbc.R100045200
Verrecchia, E. P. y Verrecchia, K. E. (1994). Needlefiber calcite: a critical review and a proposed classification. J. Sediment. Res., A64: 650-664.
Vlasceanu, L., Sarbu, S. M., Engel, A. S. y Kinkle, B. K. (2000). Acidic cave-wall biofilms located in the Frasassi Gorge, Italy. Geomicrobiol. J., 17: 125-140. doi:10.1080/01490450050023809
Ward, D. M., Weller, R. y Bateson, M. M. (1990). 16S rRNA sequences reveal numerous uncultured microorganisms in a natural community. Nature, 345: 63-65.
Warscheid, Th. y Braams, J. (2000). Bioreceptivity of building stones. Int. Biodeter. Biodegr., 46: 343-368.
Wierzchos, J., Ascaso, C., Agar, F. J., García-Orellana, I., Carmona-Luque, A. y Respaldiza, M. A. (2006a). Identifying elements in rocks from the Dry Valleys desert (Antarctica) by ion beam proton induced X-ray emission. Nuclear instruments & methods in physics research section b-beam interactions with materials and atoms, 249: 571-574. doi:10.1016/j.nimb.2006.03.057
Wierzchos, J., Ascaso, C. y McKay, C. P. (2006b). Endolithic cyanobacteria in halite rocks from the hyperarid core of the Atacama Desert. Astrobiology, 6: 415-422. doi:10.1089/ast.2006.6.415
Zavarzin, G. A. (2002). Microbial Geochemical Calcium Cycle. Microbiology, 71: 1-17. doi:10.1023/A:1017945329951
Zimmermann, J., González, J. M., Ludwig, W., Saiz- Jiménez, C. (2005). Detection and phylogenetic relationships of a highly diverse uncultured acidobacterial community on paleolithic paintings in Altamira Cave using 23S rRNA sequence analyses. Geomicrobiol. J., 22: 379-388. doi:10.1080/01490450500248986
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